Manipulating brain image volumes#

See Manipulating images: resampling, smoothing, masking, ROIs… for more details.

Negating an image with math_img

Negating an image with math_img

Negating an image with math_img
Comparing the means of 2 images

Comparing the means of 2 images

Comparing the means of 2 images
Smoothing an image

Smoothing an image

Smoothing an image
Regions Extraction of Default Mode Networks using Smith Atlas

Regions Extraction of Default Mode Networks using Smith Atlas

Regions Extraction of Default Mode Networks using Smith Atlas
Breaking an atlas of labels in separated regions

Breaking an atlas of labels in separated regions

Breaking an atlas of labels in separated regions
Resample an image to a template

Resample an image to a template

Resample an image to a template
Simple example of NiftiMasker use

Simple example of NiftiMasker use

Simple example of NiftiMasker use
Extracting signals from brain regions using the NiftiLabelsMasker

Extracting signals from brain regions using the NiftiLabelsMasker

Extracting signals from brain regions using the NiftiLabelsMasker
Region Extraction using a t-statistical map (3D)

Region Extraction using a t-statistical map (3D)

Region Extraction using a t-statistical map (3D)
Understanding NiftiMasker and mask computation

Understanding NiftiMasker and mask computation

Understanding NiftiMasker and mask computation
Visualization of affine resamplings

Visualization of affine resamplings

Visualization of affine resamplings
Computing a Region of Interest (ROI) mask manually

Computing a Region of Interest (ROI) mask manually

Computing a Region of Interest (ROI) mask manually